STRINGSTRING
Psyr_3660 Psyr_3660 Psyr_3659 Psyr_3659 Psyr_0556 Psyr_0556 Psyr_2056 Psyr_2056 Psyr_0856 Psyr_0856 Psyr_0640 Psyr_0640 Psyr_1057 Psyr_1057 Psyr_5024 Psyr_5024 Psyr_0455 Psyr_0455 Psyr_1060 Psyr_1060 Psyr_3551 Psyr_3551
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3660Conserved hypothetical protein. (175 aa)    
Predicted Functional Partners:
Psyr_3659
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
  
    0.854
Psyr_0556
Histidine kinase, HAMP region.
  
     0.759
Psyr_2056
CHAD.
  
     0.713
Psyr_0856
Conserved hypothetical protein.
  
     0.710
Psyr_0640
Lipoprotein, putative.
  
     0.685
Psyr_1057
Alginate biosynthesis protein AlgX.
  
     0.668
Psyr_5024
Conserved hypothetical protein.
  
     0.650
Psyr_0455
Amine oxidase.
  
     0.617
Psyr_1060
Sel1-like repeat protein.
  
     0.590
Psyr_3551
Arc-like DNA binding protein.
  
   
 0.589
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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