STRINGSTRING
CysM CysM Psyr_4324 Psyr_4324 Psyr_0360 Psyr_0360 Psyr_1235 Psyr_1235 cysN cysN rlmD rlmD Psyr_4662 Psyr_4662 metZ metZ cysS cysS Psyr_0607 Psyr_0607 cysD cysD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CysMCysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (313 aa)    
Predicted Functional Partners:
Psyr_4324
Serine O-acetyltransferase.
 
 0.981
Psyr_0360
Serine O-acetyltransferase.
 
 0.980
Psyr_1235
Serine O-acetyltransferase.
 
 0.979
cysN
Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.898
rlmD
23S rRNA m(5)U-1939 methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
  
    0.816
Psyr_4662
Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.799
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.746
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.675
Psyr_0607
Cystathionine beta-lyase.
 
 
 0.661
cysD
Sulfate adenylyltransferase subunit 2.
  
  
 0.609
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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