STRINGSTRING
Psyr_3715 Psyr_3715 Psyr_3716 Psyr_3716 Psyr_3714 Psyr_3714 Psyr_2445 Psyr_2445 Psyr_5025 Psyr_5025 Psyr_3793 Psyr_3793 Psyr_1111 Psyr_1111 Psyr_5032 Psyr_5032 Psyr_3589 Psyr_3589 Psyr_0489 Psyr_0489 Psyr_3084 Psyr_3084
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3715ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal. (536 aa)    
Predicted Functional Partners:
Psyr_3716
Response regulator receiver:Transcriptional regulatory protein, C-terminal.
 
 0.996
Psyr_3714
Ferric iron reductase.
       0.795
Psyr_2445
Multi-sensor hybrid histidine kinase.
 
 
0.790
Psyr_5025
Conserved hypothetical protein.
  
     0.732
Psyr_3793
Response regulator receiver:Transcriptional regulatory protein, C-terminal.
 
 
 0.725
Psyr_1111
Response regulator receiver:Transcriptional regulatory protein, C-terminal.
 
 
 0.723
Psyr_5032
Response regulator receiver:Transcriptional regulatory protein, C-terminal.
 
 0.723
Psyr_3589
Response regulator receiver:Transcriptional regulatory protein, C-terminal.
 
 
 0.716
Psyr_0489
Response regulator receiver.
 
 
 0.700
Psyr_3084
Response regulator receiver:Transcriptional regulatory protein, C-terminal.
 
 
 0.694
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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