STRINGSTRING
Psyr_3825 Psyr_3825 Psyr_3824 Psyr_3824 Psyr_1982 Psyr_1982 Psyr_3826 Psyr_3826 Psyr_1800 Psyr_1800 Psyr_2713 Psyr_2713 Psyr_3600 Psyr_3600 Psyr_2532 Psyr_2532 Psyr_0421 Psyr_0421 CysB CysB Psyr_4944 Psyr_4944
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3825Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
Psyr_3824
Conserved hypothetical protein.
       0.594
Psyr_1982
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.509
Psyr_3826
Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
    0.481
Psyr_1800
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.471
Psyr_2713
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.467
Psyr_3600
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.454
Psyr_2532
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.449
Psyr_0421
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.447
CysB
Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
    0.436
Psyr_4944
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.431
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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