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Psyr_3855 Psyr_3855 dinG dinG Psyr_2741 Psyr_2741 Psyr_0531 Psyr_0531 Psyr_1033 Psyr_1033 Psyr_3854 Psyr_3854 Psyr_0540 Psyr_0540 pdxH pdxH Psyr_3915 Psyr_3915 Psyr_1794 Psyr_1794
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3855Beta-lactamase. (382 aa)    
Predicted Functional Partners:
dinG
Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase.
       0.559
Psyr_2741
Beta-lactamase.
  
     0.546
Psyr_0531
LmbE-like protein.
 
     0.505
Psyr_1033
YebG.
  
     0.493
Psyr_3854
OmpA/MotB.
       0.486
Psyr_0540
Oxidoreductase, FAD-binding protein.
  
     0.470
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
 
     0.449
Psyr_3915
Alpha/beta hydrolase fold protein.
  
   
 0.431
Psyr_1794
Amino acid adenylation.
  
  
 0.405
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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