STRINGSTRING
Psyr_3859 Psyr_3859 Psyr_3858 Psyr_3858 Psyr_3985 Psyr_3985 Psyr_0029 Psyr_0029 Psyr_3857 Psyr_3857 Psyr_0603 Psyr_0603 Psyr_0145 Psyr_0145 Psyr_4818 Psyr_4818
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3859Purine nucleoside permease. (343 aa)    
Predicted Functional Partners:
Psyr_3858
Nucleoside-specific channel-forming protein, Tsx.
       0.716
Psyr_3985
Pectate lyase/Amb allergen.
  
     0.451
Psyr_0029
Sulfatase.
  
     0.448
Psyr_3857
Conserved hypothetical protein.
       0.422
Psyr_0603
N-acylglucosamine 2-epimerase.
  
     0.418
Psyr_0145
Conserved hypothetical protein.
  
     0.406
Psyr_4818
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
  
     0.403
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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