STRINGSTRING
Psyr_3899 Psyr_3899 GltB GltB Psyr_2457 Psyr_2457 fdhD fdhD Psyr_3416 Psyr_3416 Psyr_1880 Psyr_1880 Psyr_2459 Psyr_2459 Psyr_3898 Psyr_3898 Psyr_2137 Psyr_2137 tuf tuf Psyr_3900 Psyr_3900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3899Molybdopterin oxidoreductase:molybdopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (702 aa)    
Predicted Functional Partners:
GltB
Glutamate synthase (NADPH) large subunit.
  
 
 0.681
Psyr_2457
Aminoglycoside phosphotransferase.
  
    0.652
fdhD
Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
  
 0.639
Psyr_3416
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.637
Psyr_1880
Cytochrome c, class I.
  
 
 0.609
Psyr_2459
Phosphoglycerate/bisphosphoglycerate mutase.
  
     0.602
Psyr_3898
Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
       0.588
Psyr_2137
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.587
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.576
Psyr_3900
Conserved hypothetical protein.
       0.539
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (18%) [HD]