STRINGSTRING
Psyr_3908 Psyr_3908 Psyr_3910 Psyr_3910 Psyr_3909 Psyr_3909 Psyr_3911 Psyr_3911 Psyr_2170 Psyr_2170 Psyr_3912 Psyr_3912 GlpD GlpD Psyr_1075 Psyr_1075 Psyr_0357 Psyr_0357 Psyr_2943 Psyr_2943 Psyr_2505 Psyr_2505
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3908L-aspartate-binding protein / L-glutamate-binding protein. (333 aa)    
Predicted Functional Partners:
Psyr_3910
L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein.
 
 0.985
Psyr_3909
L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein.
 
 0.983
Psyr_3911
L-aspartate ABC transporter ATP-binding protein.
 0.975
Psyr_2170
L-glutamate-binding protein / L-aspartate-binding protein.
  
  
 
0.901
Psyr_3912
ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.
 
   
 0.551
GlpD
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.454
Psyr_1075
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.434
Psyr_0357
Diaminopimelate ABC transporter membrane protein.
 
 
 0.431
Psyr_2943
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
  
   0.426
Psyr_2505
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 
 0.412
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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