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Psyr_3955 Psyr_3955 Psyr_3957 Psyr_3957 Psyr_2445 Psyr_2445 Psyr_3953 Psyr_3953 Psyr_3956 Psyr_3956 glpK glpK lepA lepA AlgU AlgU rplI rplI Psyr_1794 Psyr_1794 Psyr_0947 Psyr_0947
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3955Peptidase S1, chymotrypsin:PDZ/DHR/GLGF; Belongs to the peptidase S1C family. (481 aa)    
Predicted Functional Partners:
Psyr_3957
Anti sigma-E protein, RseA.
 
 
 0.870
Psyr_2445
Multi-sensor hybrid histidine kinase.
  
  
 0.659
Psyr_3953
Signal peptidase I, Serine peptidase, MEROPS family S26A; Belongs to the peptidase S26 family.
 
   
 0.647
Psyr_3956
Sigma E regulatory protein, MucB/RseB.
  
  
 0.632
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.590
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
     
 0.577
AlgU
RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.538
rplI
LSU ribosomal protein L9P; Binds to the 23S rRNA.
 
 
 
 0.528
Psyr_1794
Amino acid adenylation.
  
 
 0.521
Psyr_0947
TPR repeat protein:TPR repeat protein.
 
   
 0.513
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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