Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_4056 | Psyr_4057 | Dehydrogenase, putative. | Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. | 0.609 |
Psyr_4056 | Psyr_4058 | Dehydrogenase, putative. | Lysine exporter protein (LYSE/YGGA). | 0.531 |
Psyr_4056 | Psyr_4059 | Dehydrogenase, putative. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.568 |
Psyr_4057 | Psyr_4056 | Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. | Dehydrogenase, putative. | 0.609 |
Psyr_4057 | Psyr_4058 | Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. | Lysine exporter protein (LYSE/YGGA). | 0.920 |
Psyr_4057 | Psyr_4059 | Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.405 |
Psyr_4058 | Psyr_4056 | Lysine exporter protein (LYSE/YGGA). | Dehydrogenase, putative. | 0.531 |
Psyr_4058 | Psyr_4057 | Lysine exporter protein (LYSE/YGGA). | Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. | 0.920 |
Psyr_4058 | Psyr_4059 | Lysine exporter protein (LYSE/YGGA). | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.502 |
Psyr_4059 | Psyr_4056 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Dehydrogenase, putative. | 0.568 |
Psyr_4059 | Psyr_4057 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. | 0.405 |
Psyr_4059 | Psyr_4058 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Lysine exporter protein (LYSE/YGGA). | 0.502 |