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Psyr_4129 Psyr_4129 Psyr_3977 Psyr_3977 Psyr_4130 Psyr_4130 Psyr_4328 Psyr_4328 cysD cysD cysN cysN Psyr_0499 Psyr_0499 metG metG Psyr_4127 Psyr_4127 Psyr_0926 Psyr_0926 Psyr_4935 Psyr_4935
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Psyr_4129Protein of unknown function DUF34. (252 aa)    
Predicted Functional Partners:
Psyr_3977
Urea amidolyase-related protein.
  
  
 0.601
Psyr_4130
Peptidase S1, chymotrypsin:PDZ/DHR/GLGF; Belongs to the peptidase S1C family.
  
    0.599
Psyr_4328
Protein of unknown function DUF633.
  
  
 0.559
cysD
Sulfate adenylyltransferase subunit 2.
       0.526
cysN
Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
       0.491
Psyr_0499
Urea amidolyase-related protein.
  
  
 0.476
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
  
 0.456
Psyr_4127
S23 ribosomal.
       0.410
Psyr_0926
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.406
Psyr_4935
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.406
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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