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Psyr_4130 Psyr_4130 Psyr_3957 Psyr_3957 Psyr_2445 Psyr_2445 Psyr_4129 Psyr_4129 glpK glpK Psyr_1350 Psyr_1350 rplI rplI Psyr_1794 Psyr_1794 Psyr_2139 Psyr_2139 Psyr_1939 Psyr_1939 rplY rplY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Psyr_4130Peptidase S1, chymotrypsin:PDZ/DHR/GLGF; Belongs to the peptidase S1C family. (386 aa)    
Predicted Functional Partners:
Psyr_3957
Anti sigma-E protein, RseA.
 
 
 0.780
Psyr_2445
Multi-sensor hybrid histidine kinase.
  
  
 0.659
Psyr_4129
Protein of unknown function DUF34.
  
    0.599
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.590
Psyr_1350
Site-2 protease, Metallo peptidase, MEROPS family M50B.
 
  
 0.560
rplI
LSU ribosomal protein L9P; Binds to the 23S rRNA.
 
 
 
 0.551
Psyr_1794
Amino acid adenylation.
  
 
 0.521
Psyr_2139
Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.493
Psyr_1939
PAS.
  
  
 0.484
rplY
LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
 
   0.450
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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