STRINGSTRING
Psyr_4139 Psyr_4139 Psyr_4140 Psyr_4140 Psyr_4141 Psyr_4141 Psyr_4138 Psyr_4138 Psyr_4137 Psyr_4137 Psyr_1910 Psyr_1910 Psyr_3760 Psyr_3760 Psyr_1913 Psyr_1913 Psyr_3452 Psyr_3452 MotB MotB Psyr_4136 Psyr_4136
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4139Mce4/Rv3499c/MTV023.06c protein. (155 aa)    
Predicted Functional Partners:
Psyr_4140
Protein of unknown function DUF140.
 
 0.999
Psyr_4141
ABC transporter.
 
 0.998
Psyr_4138
Toluene tolerance.
  
 0.986
Psyr_4137
Sulfate transporter/antisigma-factor antagonist STAS.
  
  0.983
Psyr_1910
VacJ-like lipoprotein.
 
   
 0.764
Psyr_3760
VacJ-like lipoprotein.
 
   
 0.752
Psyr_1913
Sulfate transporter/antisigma-factor antagonist STAS.
  
   0.647
Psyr_3452
Sulfate transporter/antisigma-factor antagonist STAS.
  
   0.647
MotB
OmpA/MotB.
 
 
   0.598
Psyr_4136
BolA-like protein; Belongs to the BolA/IbaG family.
     
 0.587
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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