STRINGSTRING
Psyr_4169 Psyr_4169 Psyr_3005 Psyr_3005 Psyr_2125 Psyr_2125 Psyr_2126 Psyr_2126 Psyr_0675 Psyr_0675 Psyr_1000 Psyr_1000 Psyr_1777 Psyr_1777 Psyr_2122 Psyr_2122 Psyr_2123 Psyr_2123 Psyr_4168 Psyr_4168 Psyr_3500 Psyr_3500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_41694-carboxymuconolactone decarboxylase. (127 aa)    
Predicted Functional Partners:
Psyr_3005
3-oxoadipate enol-lactonase.
  
 0.994
Psyr_2125
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.968
Psyr_2126
4-carboxymuconolactone decarboxylase.
  
  
 
0.907
Psyr_0675
Transcriptional regulator, TetR family.
      
 0.760
Psyr_1000
Transcriptional regulator, TetR family.
      
 0.760
Psyr_1777
Transcriptional regulator, TetR family.
      
 0.760
Psyr_2122
Protocatechuate 3,4-dioxygenase, beta subunit.
 
  
 0.740
Psyr_2123
Protocatechuate 3,4-dioxygenase, alpha subunit.
 
  
 0.699
Psyr_4168
K+-dependent Na+/Ca+ exchanger related-protein.
       0.697
Psyr_3500
4-hydroxybenzoate 3-monooxygenase.
 
   
 0.692
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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