STRINGSTRING
Psyr_4241 Psyr_4241 Psyr_4240 Psyr_4240 Psyr_4239 Psyr_4239 Psyr_4238 Psyr_4238 DppF DppF Psyr_4236 Psyr_4236 Psyr_4235 Psyr_4235 Psyr_2539 Psyr_2539 Psyr_2680 Psyr_2680 Psyr_4214 Psyr_4214 Psyr_2960 Psyr_2960
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4241Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; Belongs to the ABC transporter superfamily. (322 aa)    
Predicted Functional Partners:
Psyr_4240
Binding-protein-dependent transport systems inner membrane component.
 
 0.994
Psyr_4239
Binding-protein-dependent transport systems inner membrane component.
 
 0.991
Psyr_4238
Extracellular solute-binding protein, family 5.
 
 
 0.972
DppF
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; Belongs to the ABC transporter superfamily.
 
 
 
0.971
Psyr_4236
Extracellular solute-binding protein, family 5.
 
 
 0.952
Psyr_4235
Extracellular solute-binding protein, family 5.
 
 
 0.943
Psyr_2539
Binding-protein-dependent transport systems inner membrane component.
  
 0.923
Psyr_2680
Binding-protein-dependent transport systems inner membrane component.
  
 0.914
Psyr_4214
Binding-protein-dependent transport systems inner membrane component.
  
 0.912
Psyr_2960
Binding-protein-dependent transport systems inner membrane component.
  
 0.893
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (16%) [ZH]