Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_0410 | Psyr_0560 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.714 |
Psyr_0410 | Psyr_0854 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.630 |
Psyr_0410 | Psyr_1903 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.645 |
Psyr_0410 | Psyr_3284 | Conserved hypothetical protein. | SOS cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.753 |
Psyr_0410 | Psyr_3286 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.607 |
Psyr_0410 | Psyr_3427 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.749 |
Psyr_0410 | Psyr_3982 | Conserved hypothetical protein. | 3-hydroxyacyl-CoA-acyl carrier protein transferase. | 0.705 |
Psyr_0410 | Psyr_4303 | Conserved hypothetical protein. | Protein of unknown function UPF0259. | 0.742 |
Psyr_0410 | Psyr_4620 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.759 |
Psyr_0560 | Psyr_0410 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.714 |
Psyr_0560 | Psyr_0854 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.771 |
Psyr_0560 | Psyr_1903 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.477 |
Psyr_0560 | Psyr_3284 | Conserved hypothetical protein. | SOS cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.691 |
Psyr_0560 | Psyr_3286 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.534 |
Psyr_0560 | Psyr_3427 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.730 |
Psyr_0560 | Psyr_3982 | Conserved hypothetical protein. | 3-hydroxyacyl-CoA-acyl carrier protein transferase. | 0.645 |
Psyr_0560 | Psyr_4303 | Conserved hypothetical protein. | Protein of unknown function UPF0259. | 0.714 |
Psyr_0560 | Psyr_4620 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.743 |
Psyr_0854 | Psyr_0410 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.630 |
Psyr_0854 | Psyr_0560 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.771 |
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