STRINGSTRING
Psyr_4304 Psyr_4304 Psyr_2659 Psyr_2659 Psyr_4303 Psyr_4303 Psyr_4585 Psyr_4585 Psyr_4373 Psyr_4373 Psyr_1695 Psyr_1695 Psyr_2792 Psyr_2792 Psyr_1138 Psyr_1138 Psyr_3820 Psyr_3820 Psyr_4396 Psyr_4396 Psyr_2528 Psyr_2528
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4304Endonuclease/exonuclease/phosphatase. (380 aa)    
Predicted Functional Partners:
Psyr_2659
Protein of unknown function DUF955.
  
     0.736
Psyr_4303
Protein of unknown function UPF0259.
       0.694
Psyr_4585
Hypothetical protein.
  
    0.693
Psyr_4373
PAS.
  
     0.665
Psyr_1695
Conserved hypothetical protein.
  
     0.660
Psyr_2792
Phage putative head morphogenesis protein, SPP1 gp7.
  
     0.631
Psyr_1138
GCN5-related N-acetyltransferase.
  
     0.629
Psyr_3820
Conserved domain protein.
  
     0.625
Psyr_4396
TPR repeat protein.
 
     0.583
Psyr_2528
Polysaccharide deacetylase.
  
     0.577
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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