STRINGSTRING
Psyr_4322 Psyr_4322 Psyr_4323 Psyr_4323 Psyr_4321 Psyr_4321 Psyr_4324 Psyr_4324 Psyr_4325 Psyr_4325 Psyr_0931 Psyr_0931 Psyr_4963 Psyr_4963 Psyr_4320 Psyr_4320 Psyr_2736 Psyr_2736 Psyr_4319 Psyr_4319
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4322Membrane protein, putative. (406 aa)    
Predicted Functional Partners:
Psyr_4323
Synthetase, putative.
 
     0.829
Psyr_4321
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
 
  
 0.814
Psyr_4324
Serine O-acetyltransferase.
       0.773
Psyr_4325
Transcriptional regulator, GntR family.
 
     0.674
Psyr_0931
Hemolysin-type calcium-binding region.
  
     0.517
Psyr_4963
Hypothetical protein.
  
     0.476
Psyr_4320
ATP-dependent helicase HrpB.
       0.469
Psyr_2736
Glycosidase, putative.
  
   
 0.403
Psyr_4319
Silent information regulator protein Sir2.
       0.402
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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