STRINGSTRING
Psyr_4386 Psyr_4386 Psyr_4019 Psyr_4019 Psyr_0546 Psyr_0546 Psyr_4095 Psyr_4095 Psyr_2971 Psyr_2971 Psyr_0128 Psyr_0128 Psyr_2359 Psyr_2359 Psyr_2996 Psyr_2996 Psyr_2159 Psyr_2159 Psyr_0640 Psyr_0640 Psyr_0763 Psyr_0763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4386Conserved hypothetical protein. (97 aa)    
Predicted Functional Partners:
Psyr_4019
H-NS family protein MvaT.
  
     0.709
Psyr_0546
Lipoprotein, putative.
  
     0.705
Psyr_4095
Conserved hypothetical protein.
  
     0.702
Psyr_2971
H-NS family protein MvaT.
  
     0.699
Psyr_0128
H-NS family protein MvaT.
  
     0.694
Psyr_2359
Conserved hypothetical protein.
  
     0.679
Psyr_2996
Conserved hypothetical protein.
  
     0.657
Psyr_2159
Lipoprotein, putative.
  
     0.632
Psyr_0640
Lipoprotein, putative.
 
     0.625
Psyr_0763
Porin, LamB type.
  
     0.585
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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