STRINGSTRING
Psyr_4409 Psyr_4409 Psyr_3720 Psyr_3720 Psyr_4408 Psyr_4408 purD purD Psyr_3549 Psyr_3549 Psyr_0501 Psyr_0501
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4409Multiple antibiotic resistance (MarC)-related protein. (198 aa)    
Predicted Functional Partners:
Psyr_3720
Filamentation induced by cAMP protein Fic.
      
 0.770
Psyr_4408
Two-component system, sensor histidine kinase RetS; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase.
       0.663
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
       0.467
Psyr_3549
MscS Mechanosensitive ion channel.
  
    0.418
Psyr_0501
MscS Mechanosensitive ion channel.
  
    0.401
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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