STRINGSTRING
Psyr_4566 Psyr_4566 anmK anmK Psyr_0275 Psyr_0275 Psyr_0569 Psyr_0569 Psyr_1760 Psyr_1760 tyrS tyrS rlpA-2 rlpA-2 Psyr_4469 Psyr_4469 Psyr_3953 Psyr_3953 Psyr_0402 Psyr_0402 Psyr_4888 Psyr_4888
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
Psyr_4566Peptidase M23B. (475 aa)    
Predicted Functional Partners:
anmK
Protein of unknown function UPF0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
    0.889
Psyr_0275
Periplasmic solute binding protein.
  
  
 0.676
Psyr_0569
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.657
Psyr_1760
Peptidoglycan-binding LysM:SLT:MLTD_N.
 
  
 0.625
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
       0.609
rlpA-2
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 
 0.581
Psyr_4469
Conserved hypothetical protein.
  
  
 0.575
Psyr_3953
Signal peptidase I, Serine peptidase, MEROPS family S26A; Belongs to the peptidase S26 family.
 
  
 0.544
Psyr_0402
Peptidoglycan glycosyltransferase.
 
   
 0.525
Psyr_4888
Protein of unknown function DUF610.
  
   
 0.498
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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