STRINGSTRING
Psyr_4571 Psyr_4571 Psyr_4024 Psyr_4024 Psyr_4023 Psyr_4023 Psyr_0371 Psyr_0371 Psyr_4021 Psyr_4021 Psyr_4022 Psyr_4022 Psyr_4572 Psyr_4572 Psyr_4570 Psyr_4570 Psyr_0508 Psyr_0508 Psyr_1695 Psyr_1695 Psyr_0620 Psyr_0620
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4571Protein of unknown function DUF805. (304 aa)    
Predicted Functional Partners:
Psyr_4024
Conserved hypothetical protein.
 
     0.742
Psyr_4023
Conserved hypothetical protein.
 
     0.718
Psyr_0371
Conserved hypothetical protein.
  
    0.671
Psyr_4021
RDD.
 
    0.656
Psyr_4022
Integral membrane protein.
 
    0.642
Psyr_4572
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.638
Psyr_4570
Conserved hypothetical protein 701.
       0.590
Psyr_0508
Lyase, putative.
  
    0.542
Psyr_1695
Conserved hypothetical protein.
  
     0.538
Psyr_0620
Outer membrane autotransporter barrel.
  
     0.528
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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