STRINGSTRING
Psyr_4572 Psyr_4572 Psyr_3542 Psyr_3542 Psyr_3935 Psyr_3935 Psyr_2297 Psyr_2297 FabG-4 FabG-4 FabG-5 FabG-5 Psyr_4571 Psyr_4571 Psyr_1670 Psyr_1670 Psyr_3545 Psyr_3545 Psyr_0123 Psyr_0123 Psyr_4573 Psyr_4573
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4572Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)    
Predicted Functional Partners:
Psyr_3542
Short-chain dehydrogenase/reductase SDR.
  
 
 
 0.711
Psyr_3935
Short-chain dehydrogenase/reductase SDR.
  
 
 
 0.704
Psyr_2297
Glucose 1-dehydrogenase.
  
 
 
 0.671
FabG-4
Short-chain dehydrogenase/reductase SDR.
  
 
 
 0.646
FabG-5
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.641
Psyr_4571
Protein of unknown function DUF805.
       0.638
Psyr_1670
Short-chain dehydrogenase/reductase SDR.
  
 
 
 0.621
Psyr_3545
Short-chain dehydrogenase/reductase SDR.
  
 
 
 0.615
Psyr_0123
Short-chain dehydrogenase/reductase SDR.
  
 
 
 0.588
Psyr_4573
Histidine triad (HIT) protein.
       0.567
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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