STRINGSTRING
Psyr_4583 Psyr_4583 Psyr_4582 Psyr_4582 Psyr_4600 Psyr_4600 Psyr_4585 Psyr_4585 Psyr_4584 Psyr_4584 Psyr_2777 Psyr_2777 Psyr_2774 Psyr_2774 Psyr_4587 Psyr_4587 Psyr_2779 Psyr_2779 Psyr_4586 Psyr_4586 Psyr_4592 Psyr_4592
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4583Glycoside hydrolase, family 19. (181 aa)    
Predicted Functional Partners:
Psyr_4582
Hypothetical protein.
  
  
 0.934
Psyr_4600
Glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.784
Psyr_4585
Hypothetical protein.
  
  
 0.736
Psyr_4584
Protein of unknown function DUF144.
  
  
 0.730
Psyr_2777
NLP/P60.
  
    0.645
Psyr_2774
Bacteriophage lambda tail assembly I.
  
    0.632
Psyr_4587
Baseplate J-like protein.
     
 0.617
Psyr_2779
Phage minor tail.
  
    0.613
Psyr_4586
Tail protein, putative.
     
 0.592
Psyr_4592
Phage tail tape measure protein TP901, core region.
     
 0.575
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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