STRINGSTRING
Psyr_4613 Psyr_4613 Psyr_4612 Psyr_4612 Psyr_4614 Psyr_4614 Psyr_2399 Psyr_2399 potA potA Psyr_2333 Psyr_2333 Psyr_4861 Psyr_4861 Psyr_2401 Psyr_2401 Psyr_2513 Psyr_2513 Psyr_4865 Psyr_4865 Psyr_4864 Psyr_4864
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4613Binding-protein-dependent transport systems inner membrane component. (415 aa)    
Predicted Functional Partners:
Psyr_4612
Binding-protein-dependent transport systems inner membrane component.
  
 0.984
Psyr_4614
Extracellular solute-binding protein, family 1.
 
  
 0.937
Psyr_2399
Binding-protein-dependent transport systems inner membrane component.
  
 0.920
potA
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.917
Psyr_2333
Binding-protein-dependent transport systems inner membrane component.
  
 0.893
Psyr_4861
Binding-protein-dependent transport systems inner membrane component.
  
 0.856
Psyr_2401
Extracellular solute-binding protein, family 1.
 
  
 0.851
Psyr_2513
Extracellular solute-binding protein, family 1.
 
  
 0.841
Psyr_4865
Extracellular solute-binding protein, family 1.
 
  
 0.838
Psyr_4864
Extracellular solute-binding protein, family 1.
 
  
 0.837
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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