STRINGSTRING
Psyr_4622 Psyr_4622 Psyr_4623 Psyr_4623 murB murB Psyr_4936 Psyr_4936 murA murA murC murC Psyr_4621 Psyr_4621 Psyr_3469 Psyr_3469 Psyr_0303 Psyr_0303 Psyr_4030 Psyr_4030 Psyr_0926 Psyr_0926
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4622Nucleotidyl transferase. (240 aa)    
Predicted Functional Partners:
Psyr_4623
Aminoglycoside phosphotransferase.
 
 
 0.992
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
    
  0.902
Psyr_4936
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.872
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.811
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
 0.806
Psyr_4621
Heat shock protein DnaJ, N-terminal.
  
    0.802
Psyr_3469
Glycosyl transferase, family 2.
  
 
 0.698
Psyr_0303
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein.
  
 
 0.682
Psyr_4030
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein.
  
 
 0.682
Psyr_0926
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.669
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.