STRINGSTRING
Psyr_4651 Psyr_4651 Psyr_4652 Psyr_4652 Psyr_4592 Psyr_4592 Psyr_4584 Psyr_4584 Psyr_4585 Psyr_4585 Psyr_4586 Psyr_4586 Psyr_4602 Psyr_4602 Psyr_4603 Psyr_4603 Psyr_4583 Psyr_4583 Psyr_4595 Psyr_4595 Psyr_4600 Psyr_4600
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4651S-type Pyocin; ISPpu14, transposase Orf3. (643 aa)    
Predicted Functional Partners:
Psyr_4652
Colicin immunity protein/pyocin immunity protein.
       0.778
Psyr_4592
Phage tail tape measure protein TP901, core region.
  
  
 0.718
Psyr_4584
Protein of unknown function DUF144.
     
 0.693
Psyr_4585
Hypothetical protein.
     
 0.680
Psyr_4586
Tail protein, putative.
      
 0.673
Psyr_4602
Hypothetical protein.
      
 0.673
Psyr_4603
Phage repressor protein, Serine peptidase, MEROPS family S24.
      
 0.673
Psyr_4583
Glycoside hydrolase, family 19.
     
 0.432
Psyr_4595
Bacteriophage Mu tail sheath.
      
 0.420
Psyr_4600
Glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
      
 0.420
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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