STRINGSTRING
Psyr_4666 Psyr_4666 Psyr_4665 Psyr_4665 Psyr_0251 Psyr_0251 Psyr_3022 Psyr_3022 Psyr_0144 Psyr_0144 Psyr_1172 Psyr_1172 Psyr_0133 Psyr_0133 Psyr_4335 Psyr_4335 Psyr_4667 Psyr_4667 PutA PutA Psyr_4668 Psyr_4668
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4666Transcriptional regulator, AsnC family. (153 aa)    
Predicted Functional Partners:
Psyr_4665
Membrane protein, putative.
       0.763
Psyr_0251
Transcriptional regulator, AsnC family.
  
  
 0.760
Psyr_3022
Transcriptional regulator, AsnC family.
  
  
 0.755
Psyr_0144
Transcriptional regulator, AsnC family.
  
     0.753
Psyr_1172
Transcriptional regulator, AsnC family.
  
     0.753
Psyr_0133
Transcriptional regulator, AsnC family.
  
     0.750
Psyr_4335
Transcriptional regulator, AsnC family.
  
   
 0.745
Psyr_4667
Tryptophan 2-monooxygenase.
       0.496
PutA
L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.491
Psyr_4668
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.465
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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