STRINGSTRING
Psyr_4725 Psyr_4725 Psyr_2082 Psyr_2082 Psyr_2081 Psyr_2081 rimK rimK Psyr_4724 Psyr_4724 Psyr_4113 Psyr_4113 Psyr_4723 Psyr_4723
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4725Protein of unknown function DUF785. (167 aa)    
Predicted Functional Partners:
Psyr_2082
Membrane protein, putative.
 
    0.796
Psyr_2081
Conserved hypothetical protein.
 
     0.787
rimK
SSU ribosomal protein S6P modification protein.
 
     0.582
Psyr_4724
Phospholipid/glycerol acyltransferase.
       0.549
Psyr_4113
LppC putative lipoprotein.
  
   
 0.437
Psyr_4723
Hypothetical protein.
       0.423
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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