STRINGSTRING
Psyr_4784 Psyr_4784 Psyr_4783 Psyr_4783 Psyr_4782 Psyr_4782 Psyr_4779 Psyr_4779 Psyr_4781 Psyr_4781 Psyr_4716 Psyr_4716 Psyr_4776 Psyr_4776 Psyr_4714 Psyr_4714 Psyr_4775 Psyr_4775 Psyr_4780 Psyr_4780 Psyr_4713 Psyr_4713
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4784Peptidase M19, renal dipeptidase. (325 aa)    
Predicted Functional Partners:
Psyr_4783
Conserved hypothetical protein.
 
  
 0.974
Psyr_4782
NADH:flavin oxidoreductase/NADH oxidase.
 
    0.929
Psyr_4779
Electron transfer flavoprotein, beta subunit.
 
    0.900
Psyr_4781
4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224.
 
    0.880
Psyr_4716
Sarcosine oxidase, gamma subunit, heterotetrameric.
 
    0.855
Psyr_4776
Rieske [2Fe-2S] region.
  
    0.849
Psyr_4714
Sarcosine oxidase, delta subunit, heterotetrameric.
 
    0.836
Psyr_4775
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region.
 
    0.764
Psyr_4780
Electron transfer flavoprotein, alpha subunit.
 
    0.718
Psyr_4713
Sarcosine oxidase, beta subunit, heterotetrameric.
  
    0.716
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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