Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_4787 | Psyr_4788 | Psyr_4787 | Psyr_4788 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | Lipoprotein, putative. | 0.574 |
Psyr_4787 | Psyr_4791 | Psyr_4787 | Psyr_4791 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.881 |
Psyr_4787 | pgk | Psyr_4787 | Psyr_4790 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.945 |
Psyr_4788 | Psyr_4787 | Psyr_4788 | Psyr_4787 | Lipoprotein, putative. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.574 |
Psyr_4788 | Psyr_4789 | Psyr_4788 | Psyr_4789 | Lipoprotein, putative. | Lipoprotein, putative. | 0.456 |
Psyr_4788 | Psyr_4791 | Psyr_4788 | Psyr_4791 | Lipoprotein, putative. | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.405 |
Psyr_4788 | pgk | Psyr_4788 | Psyr_4790 | Lipoprotein, putative. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.425 |
Psyr_4789 | Psyr_4788 | Psyr_4789 | Psyr_4788 | Lipoprotein, putative. | Lipoprotein, putative. | 0.456 |
Psyr_4789 | Psyr_4791 | Psyr_4789 | Psyr_4791 | Lipoprotein, putative. | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.642 |
Psyr_4789 | pgk | Psyr_4789 | Psyr_4790 | Lipoprotein, putative. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.704 |
Psyr_4791 | Psyr_4787 | Psyr_4791 | Psyr_4787 | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.881 |
Psyr_4791 | Psyr_4788 | Psyr_4791 | Psyr_4788 | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Lipoprotein, putative. | 0.405 |
Psyr_4791 | Psyr_4789 | Psyr_4791 | Psyr_4789 | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Lipoprotein, putative. | 0.642 |
Psyr_4791 | pgk | Psyr_4791 | Psyr_4790 | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.984 |
pgk | Psyr_4787 | Psyr_4790 | Psyr_4787 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.945 |
pgk | Psyr_4788 | Psyr_4790 | Psyr_4788 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Lipoprotein, putative. | 0.425 |
pgk | Psyr_4789 | Psyr_4790 | Psyr_4789 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Lipoprotein, putative. | 0.704 |
pgk | Psyr_4791 | Psyr_4790 | Psyr_4791 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.984 |