STRINGSTRING
Psyr_4793 Psyr_4793 metK metK Psyr_0972 Psyr_0972 Psyr_3285 Psyr_3285 Psyr_0187 Psyr_0187 Psyr_0286 Psyr_0286 Psyr_1033 Psyr_1033 Psyr_0833 Psyr_0833 Psyr_0493 Psyr_0493 Psyr_1794 Psyr_1794 Psyr_1913 Psyr_1913
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4793Transcriptional regulator, ArsR family. (331 aa)    
Predicted Functional Partners:
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.823
Psyr_0972
Conserved hypothetical protein.
  
     0.754
Psyr_3285
Conserved hypothetical protein.
  
     0.732
Psyr_0187
Conserved hypothetical protein.
  
     0.729
Psyr_0286
Conserved hypothetical protein.
  
     0.721
Psyr_1033
YebG.
  
     0.674
Psyr_0833
Conserved hypothetical protein.
  
     0.621
Psyr_0493
CheW-like protein.
  
     0.598
Psyr_1794
Amino acid adenylation.
     
 0.573
Psyr_1913
Sulfate transporter/antisigma-factor antagonist STAS.
  
    0.558
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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