STRINGSTRING
Psyr_4826 Psyr_4826 Psyr_2287 Psyr_2287 Psyr_2892 Psyr_2892 Psyr_2290 Psyr_2290 Psyr_0138 Psyr_0138 Psyr_0135 Psyr_0135 Psyr_4825 Psyr_4825 Psyr_3864 Psyr_3864 Psyr_4480 Psyr_4480 Psyr_0203 Psyr_0203 Psyr_0875 Psyr_0875
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4826TonB-dependent receptor:TonB box, N-terminal. (755 aa)    
Predicted Functional Partners:
Psyr_2287
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.888
Psyr_2892
TonB-dependent receptor:TonB-dependent receptor.
 
  
 0.790
Psyr_2290
TonB-dependent receptor:TonB-dependent receptor.
 
  
 0.778
Psyr_0138
TonB-dependent receptor:TonB-dependent receptor.
 
  
 0.757
Psyr_0135
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.709
Psyr_4825
Xenobiotic compound monooxygenase, DszA family, A subunit.
  
    0.680
Psyr_3864
TonB-dependent siderophore receptor.
  
  
 0.626
Psyr_4480
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.626
Psyr_0203
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.621
Psyr_0875
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.606
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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