Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GltB | Psyr_4827 | Psyr_0411 | Psyr_4827 | Glutamate synthase (NADPH) large subunit. | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.412 |
GltB | betA | Psyr_0411 | Psyr_4732 | Glutamate synthase (NADPH) large subunit. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.446 |
Psyr_0507 | Psyr_4827 | Psyr_0507 | Psyr_4827 | Na+/solute symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.540 |
Psyr_0507 | Psyr_5052 | Psyr_0507 | Psyr_5052 | Na+/solute symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Sodium:alanine symporter. | 0.747 |
Psyr_4827 | GltB | Psyr_4827 | Psyr_0411 | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Glutamate synthase (NADPH) large subunit. | 0.412 |
Psyr_4827 | Psyr_0507 | Psyr_4827 | Psyr_0507 | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Na+/solute symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Psyr_4827 | Psyr_5052 | Psyr_4827 | Psyr_5052 | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Sodium:alanine symporter. | 0.434 |
Psyr_4827 | betA | Psyr_4827 | Psyr_4732 | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.569 |
Psyr_4827 | betI | Psyr_4827 | Psyr_4734 | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Transcriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). | 0.450 |
Psyr_5052 | Psyr_0507 | Psyr_5052 | Psyr_0507 | Sodium:alanine symporter. | Na+/solute symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.747 |
Psyr_5052 | Psyr_4827 | Psyr_5052 | Psyr_4827 | Sodium:alanine symporter. | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.434 |
betA | GltB | Psyr_4732 | Psyr_0411 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | Glutamate synthase (NADPH) large subunit. | 0.446 |
betA | Psyr_4827 | Psyr_4732 | Psyr_4827 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.569 |
betA | betI | Psyr_4732 | Psyr_4734 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | Transcriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). | 0.910 |
betI | Psyr_4827 | Psyr_4734 | Psyr_4827 | Transcriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). | BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.450 |
betI | betA | Psyr_4734 | Psyr_4732 | Transcriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.910 |