Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_0028 | Psyr_2916 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.468 |
Psyr_0028 | Psyr_3758 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.756 |
Psyr_0028 | Psyr_3778 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.499 |
Psyr_0028 | Psyr_4710 | Substrate-binding region of ABC-type glycine betaine transport system. | Binding-protein-dependent transport systems inner membrane component. | 0.989 |
Psyr_0028 | Psyr_4711 | Substrate-binding region of ABC-type glycine betaine transport system. | Glycine betaine/L-proline transport ATP-binding subunit. | 0.984 |
Psyr_0028 | Psyr_4829 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.463 |
Psyr_0028 | Psyr_4830 | Substrate-binding region of ABC-type glycine betaine transport system. | Binding-protein-dependent transport systems inner membrane component. | 0.980 |
Psyr_0028 | Psyr_4831 | Substrate-binding region of ABC-type glycine betaine transport system. | ABC transporter. | 0.982 |
Psyr_2916 | Psyr_0028 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.468 |
Psyr_2916 | Psyr_3758 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.633 |
Psyr_2916 | Psyr_3778 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.415 |
Psyr_2916 | Psyr_4709 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.402 |
Psyr_2916 | Psyr_4710 | Substrate-binding region of ABC-type glycine betaine transport system. | Binding-protein-dependent transport systems inner membrane component. | 0.980 |
Psyr_2916 | Psyr_4711 | Substrate-binding region of ABC-type glycine betaine transport system. | Glycine betaine/L-proline transport ATP-binding subunit. | 0.984 |
Psyr_2916 | Psyr_4829 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.463 |
Psyr_2916 | Psyr_4830 | Substrate-binding region of ABC-type glycine betaine transport system. | Binding-protein-dependent transport systems inner membrane component. | 0.973 |
Psyr_2916 | Psyr_4831 | Substrate-binding region of ABC-type glycine betaine transport system. | ABC transporter. | 0.981 |
Psyr_3758 | Psyr_0028 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.756 |
Psyr_3758 | Psyr_2916 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.633 |
Psyr_3758 | Psyr_3778 | Substrate-binding region of ABC-type glycine betaine transport system. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.520 |
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