Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0821 | Psyr_4834 | Psyr_0821 | Psyr_4834 | Phosphoenolpyruvate-protein phosphotransferase; TC 4.A.2.1.1; Belongs to the PEP-utilizing enzyme family. | Histidine:proton symporter, AAT family; TC 2.A.3.1.9. | 0.428 |
Psyr_4829 | Psyr_4830 | Psyr_4829 | Psyr_4830 | Substrate-binding region of ABC-type glycine betaine transport system. | Binding-protein-dependent transport systems inner membrane component. | 0.998 |
Psyr_4829 | Psyr_4831 | Psyr_4829 | Psyr_4831 | Substrate-binding region of ABC-type glycine betaine transport system. | ABC transporter. | 0.990 |
Psyr_4829 | Psyr_4832 | Psyr_4829 | Psyr_4832 | Substrate-binding region of ABC-type glycine betaine transport system. | Histidine ammonia-lyase. | 0.681 |
Psyr_4829 | Psyr_4834 | Psyr_4829 | Psyr_4834 | Substrate-binding region of ABC-type glycine betaine transport system. | Histidine:proton symporter, AAT family; TC 2.A.3.1.9. | 0.524 |
Psyr_4829 | Psyr_4836 | Psyr_4829 | Psyr_4836 | Substrate-binding region of ABC-type glycine betaine transport system. | N-formylglutamate deformylase. | 0.654 |
Psyr_4829 | hutH | Psyr_4829 | Psyr_4833 | Substrate-binding region of ABC-type glycine betaine transport system. | Histidine ammonia-lyase. | 0.604 |
Psyr_4829 | hutI | Psyr_4829 | Psyr_4835 | Substrate-binding region of ABC-type glycine betaine transport system. | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | 0.622 |
Psyr_4830 | Psyr_4829 | Psyr_4830 | Psyr_4829 | Binding-protein-dependent transport systems inner membrane component. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.998 |
Psyr_4830 | Psyr_4831 | Psyr_4830 | Psyr_4831 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter. | 0.998 |
Psyr_4830 | Psyr_4832 | Psyr_4830 | Psyr_4832 | Binding-protein-dependent transport systems inner membrane component. | Histidine ammonia-lyase. | 0.825 |
Psyr_4830 | Psyr_4834 | Psyr_4830 | Psyr_4834 | Binding-protein-dependent transport systems inner membrane component. | Histidine:proton symporter, AAT family; TC 2.A.3.1.9. | 0.633 |
Psyr_4830 | Psyr_4836 | Psyr_4830 | Psyr_4836 | Binding-protein-dependent transport systems inner membrane component. | N-formylglutamate deformylase. | 0.767 |
Psyr_4830 | hutH | Psyr_4830 | Psyr_4833 | Binding-protein-dependent transport systems inner membrane component. | Histidine ammonia-lyase. | 0.712 |
Psyr_4830 | hutI | Psyr_4830 | Psyr_4835 | Binding-protein-dependent transport systems inner membrane component. | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. | 0.685 |
Psyr_4831 | Psyr_4829 | Psyr_4831 | Psyr_4829 | ABC transporter. | Substrate-binding region of ABC-type glycine betaine transport system. | 0.990 |
Psyr_4831 | Psyr_4830 | Psyr_4831 | Psyr_4830 | ABC transporter. | Binding-protein-dependent transport systems inner membrane component. | 0.998 |
Psyr_4831 | Psyr_4832 | Psyr_4831 | Psyr_4832 | ABC transporter. | Histidine ammonia-lyase. | 0.779 |
Psyr_4831 | Psyr_4834 | Psyr_4831 | Psyr_4834 | ABC transporter. | Histidine:proton symporter, AAT family; TC 2.A.3.1.9. | 0.490 |
Psyr_4831 | Psyr_4836 | Psyr_4831 | Psyr_4836 | ABC transporter. | N-formylglutamate deformylase. | 0.567 |
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