STRINGSTRING
Psyr_4930 Psyr_4930 Psyr_4849 Psyr_4849 Psyr_3284 Psyr_3284 Psyr_4232 Psyr_4232 Psyr_5099 Psyr_5099 Psyr_0531 Psyr_0531 Psyr_0683 Psyr_0683 Psyr_2095 Psyr_2095 Psyr_4076 Psyr_4076 Psyr_2056 Psyr_2056 Psyr_4848 Psyr_4848
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4930Outer membrane porin. (424 aa)    
Predicted Functional Partners:
Psyr_4849
SdiA-regulated.
  
     0.637
Psyr_3284
SOS cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.613
Psyr_4232
Protein of unknown function DUF541.
  
     0.597
Psyr_5099
Conserved hypothetical protein.
  
     0.582
Psyr_0531
LmbE-like protein.
  
     0.581
Psyr_0683
NUDIX hydrolase.
  
     0.561
Psyr_2095
Conserved TM helix.
  
     0.555
Psyr_4076
Conserved hypothetical protein.
  
     0.539
Psyr_2056
CHAD.
  
     0.530
Psyr_4848
SdiA-regulated.
  
     0.530
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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