STRINGSTRING
Psyr_4946 Psyr_4946 fdhD fdhD GltB GltB Psyr_3416 Psyr_3416 Psyr_1880 Psyr_1880 tuf tuf Psyr_4944 Psyr_4944 Psyr_3414 Psyr_3414 Psyr_4947 Psyr_4947 Psyr_3021 Psyr_3021 Psyr_0049 Psyr_0049
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4946Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (778 aa)    
Predicted Functional Partners:
fdhD
Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
  
 0.970
GltB
Glutamate synthase (NADPH) large subunit.
  
 
 0.681
Psyr_3416
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.637
Psyr_1880
Cytochrome c, class I.
  
 
 0.609
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.576
Psyr_4944
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.527
Psyr_3414
Cytochrome C oxidase, mono-heme subunit/FixO.
  
  
 0.503
Psyr_4947
Conserved hypothetical protein.
       0.488
Psyr_3021
Pyruvate decarboxylase:Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
  
 0.471
Psyr_0049
Cytochrome c, class I:Iron permease FTR1.
  
 
 0.458
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (14%) [HD]