Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_4952 | Psyr_4953 | Hypothetical protein. | Uncharacterized conserved protein UCP028301. | 0.660 |
Psyr_4952 | Psyr_4954 | Hypothetical protein. | Protein of unknown function DUF877. | 0.587 |
Psyr_4952 | Psyr_4955 | Hypothetical protein. | Protein of unknown function DUF1316. | 0.534 |
Psyr_4952 | Psyr_4956 | Hypothetical protein. | Protein of unknown function DUF879. | 0.534 |
Psyr_4952 | Psyr_4957 | Hypothetical protein. | Protein of unknown function DUF1305. | 0.535 |
Psyr_4952 | Psyr_4958 | Hypothetical protein. | AAA ATPase, central region:Clp, N terminal:Clp, N terminal; Belongs to the ClpA/ClpB family. | 0.499 |
Psyr_4952 | Psyr_4959 | Hypothetical protein. | Conserved hypothetical protein. | 0.474 |
Psyr_4952 | Psyr_4960 | Hypothetical protein. | Protein of unknown function DUF876. | 0.490 |
Psyr_4952 | Psyr_4961 | Hypothetical protein. | Conserved hypothetical protein. | 0.490 |
Psyr_4952 | Psyr_4962 | Hypothetical protein. | ImcF-related:Protein of unknown function DUF1215. | 0.422 |
Psyr_4953 | Psyr_4952 | Uncharacterized conserved protein UCP028301. | Hypothetical protein. | 0.660 |
Psyr_4953 | Psyr_4954 | Uncharacterized conserved protein UCP028301. | Protein of unknown function DUF877. | 0.999 |
Psyr_4953 | Psyr_4955 | Uncharacterized conserved protein UCP028301. | Protein of unknown function DUF1316. | 0.979 |
Psyr_4953 | Psyr_4956 | Uncharacterized conserved protein UCP028301. | Protein of unknown function DUF879. | 0.970 |
Psyr_4953 | Psyr_4957 | Uncharacterized conserved protein UCP028301. | Protein of unknown function DUF1305. | 0.970 |
Psyr_4953 | Psyr_4958 | Uncharacterized conserved protein UCP028301. | AAA ATPase, central region:Clp, N terminal:Clp, N terminal; Belongs to the ClpA/ClpB family. | 0.952 |
Psyr_4953 | Psyr_4959 | Uncharacterized conserved protein UCP028301. | Conserved hypothetical protein. | 0.961 |
Psyr_4953 | Psyr_4960 | Uncharacterized conserved protein UCP028301. | Protein of unknown function DUF876. | 0.979 |
Psyr_4953 | Psyr_4961 | Uncharacterized conserved protein UCP028301. | Conserved hypothetical protein. | 0.972 |
Psyr_4953 | Psyr_4962 | Uncharacterized conserved protein UCP028301. | ImcF-related:Protein of unknown function DUF1215. | 0.931 |
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