STRINGSTRING
Psyr_4954 Psyr_4954 Psyr_4953 Psyr_4953 Psyr_4961 Psyr_4961 Psyr_4956 Psyr_4956 Psyr_4958 Psyr_4958 Psyr_4955 Psyr_4955 Psyr_4957 Psyr_4957 Psyr_4960 Psyr_4960 Psyr_4964 Psyr_4964 Psyr_4959 Psyr_4959 Psyr_4962 Psyr_4962
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4954Protein of unknown function DUF877. (500 aa)    
Predicted Functional Partners:
Psyr_4953
Uncharacterized conserved protein UCP028301.
 
 0.999
Psyr_4961
Conserved hypothetical protein.
 
  
 0.985
Psyr_4956
Protein of unknown function DUF879.
 
  
 0.975
Psyr_4958
AAA ATPase, central region:Clp, N terminal:Clp, N terminal; Belongs to the ClpA/ClpB family.
 
 
 0.974
Psyr_4955
Protein of unknown function DUF1316.
 
  
 0.973
Psyr_4957
Protein of unknown function DUF1305.
 
  
 0.967
Psyr_4960
Protein of unknown function DUF876.
 
  
 0.958
Psyr_4964
OmpA/MotB.
 
  
 0.957
Psyr_4959
Conserved hypothetical protein.
 
  
 0.956
Psyr_4962
ImcF-related:Protein of unknown function DUF1215.
 
  
 0.952
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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