STRINGSTRING
Psyr_4966 Psyr_4966 Psyr_4957 Psyr_4957 Psyr_4953 Psyr_4953 Psyr_4965 Psyr_4965 Psyr_4954 Psyr_4954 Psyr_4956 Psyr_4956 Psyr_4955 Psyr_4955 Psyr_4960 Psyr_4960 Psyr_4959 Psyr_4959 Psyr_4964 Psyr_4964 Psyr_4961 Psyr_4961
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4966ImpA, N-terminal. (364 aa)    
Predicted Functional Partners:
Psyr_4957
Protein of unknown function DUF1305.
 
  
 0.978
Psyr_4953
Uncharacterized conserved protein UCP028301.
 
  
 0.963
Psyr_4965
Protein of unknown function DUF796.
 
  
 0.946
Psyr_4954
Protein of unknown function DUF877.
 
  
 0.933
Psyr_4956
Protein of unknown function DUF879.
 
  
 0.916
Psyr_4955
Protein of unknown function DUF1316.
 
  
 0.915
Psyr_4960
Protein of unknown function DUF876.
 
  
 0.910
Psyr_4959
Conserved hypothetical protein.
 
  
 0.900
Psyr_4964
OmpA/MotB.
 
  
 0.899
Psyr_4961
Conserved hypothetical protein.
 
  
 0.896
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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