STRINGSTRING
Psyr_4971 Psyr_4971 Psyr_4970 Psyr_4970 glyA2 glyA2 glyA1 glyA1 Psyr_4969 Psyr_4969 Psyr_4972 Psyr_4972 Psyr_4974 Psyr_4974 Psyr_4665 Psyr_4665 Psyr_2893 Psyr_2893 Psyr_1035 Psyr_1035 Psyr_4973 Psyr_4973
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Psyr_4971Sel1-like repeat protein. (318 aa)    
Predicted Functional Partners:
Psyr_4970
Phospholipase D/Transphosphatidylase.
 
   
 0.908
glyA2
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
      
 0.673
glyA1
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
      
 0.661
Psyr_4969
PAAR.
 
   
 0.569
Psyr_4972
Sel1-like repeat protein.
 
    
0.532
Psyr_4974
Rhs element Vgr protein.
 
    0.517
Psyr_4665
Membrane protein, putative.
  
     0.516
Psyr_2893
Probable lipoprotein.
  
     0.467
Psyr_1035
Lipoprotein, putative.
 
  
 0.459
Psyr_4973
Hypothetical protein.
       0.409
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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