STRINGSTRING
Psyr_4985 Psyr_4985 Psyr_4986 Psyr_4986 Psyr_4805 Psyr_4805 Psyr_4994 Psyr_4994 Psyr_4987 Psyr_4987 Psyr_4983 Psyr_4983 Psyr_4984 Psyr_4984 Psyr_0310 Psyr_0310 Psyr_0441 Psyr_0441 Psyr_0685 Psyr_0685 Psyr_4083 Psyr_4083
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4985Conserved hypothetical protein. (155 aa)    
Predicted Functional Partners:
Psyr_4986
YD repeat protein.
  
 
 0.982
Psyr_4805
YD repeat protein.
  
 
 0.927
Psyr_4994
Rhs-related protein.
  
 
 0.927
Psyr_4987
Conserved hypothetical protein.
       0.773
Psyr_4983
Rhs element Vgr protein.
  
  
 0.668
Psyr_4984
Conserved hypothetical protein.
       0.666
Psyr_0310
HNH endonuclease:S-type Pyocin.
  
 
 0.665
Psyr_0441
Conserved hypothetical protein.
  
 
 0.665
Psyr_0685
PAAR.
  
 
 0.665
Psyr_4083
PAAR.
  
 
 0.665
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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