Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0687 | Psyr_0931 | Psyr_0687 | Psyr_0931 | Conserved hypothetical protein. | Hemolysin-type calcium-binding region. | 0.707 |
Psyr_0687 | Psyr_2040 | Psyr_0687 | Psyr_2040 | Conserved hypothetical protein. | YD repeat protein. | 0.624 |
Psyr_0687 | Psyr_2610 | Psyr_0687 | Psyr_2610 | Conserved hypothetical protein. | Chlorinating enzyme. | 0.524 |
Psyr_0687 | Psyr_4872 | Psyr_0687 | Psyr_4872 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.745 |
Psyr_0687 | Psyr_4959 | Psyr_0687 | Psyr_4959 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.541 |
Psyr_0687 | Psyr_4990 | Psyr_0687 | Psyr_4990 | Conserved hypothetical protein. | YD repeat protein. | 0.624 |
Psyr_0931 | Psyr_0687 | Psyr_0931 | Psyr_0687 | Hemolysin-type calcium-binding region. | Conserved hypothetical protein. | 0.707 |
Psyr_0931 | Psyr_2610 | Psyr_0931 | Psyr_2610 | Hemolysin-type calcium-binding region. | Chlorinating enzyme. | 0.594 |
Psyr_0931 | Psyr_4872 | Psyr_0931 | Psyr_4872 | Hemolysin-type calcium-binding region. | Conserved hypothetical protein. | 0.814 |
Psyr_0931 | Psyr_4990 | Psyr_0931 | Psyr_4990 | Hemolysin-type calcium-binding region. | YD repeat protein. | 0.554 |
Psyr_2040 | Psyr_0687 | Psyr_2040 | Psyr_0687 | YD repeat protein. | Conserved hypothetical protein. | 0.624 |
Psyr_2040 | Psyr_2610 | Psyr_2040 | Psyr_2610 | YD repeat protein. | Chlorinating enzyme. | 0.409 |
Psyr_2040 | Psyr_4872 | Psyr_2040 | Psyr_4872 | YD repeat protein. | Conserved hypothetical protein. | 0.576 |
Psyr_2040 | Psyr_4990 | Psyr_2040 | Psyr_4990 | YD repeat protein. | YD repeat protein. | 0.731 |
Psyr_2040 | bioD | Psyr_2040 | Psyr_4683 | YD repeat protein. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.673 |
Psyr_2320 | Psyr_4990 | Psyr_2320 | Psyr_4990 | YD repeat protein; Methyl-accepting chemotaxis protein. | YD repeat protein. | 0.629 |
Psyr_2320 | bioD | Psyr_2320 | Psyr_4683 | YD repeat protein; Methyl-accepting chemotaxis protein. | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.673 |
Psyr_2610 | Psyr_0687 | Psyr_2610 | Psyr_0687 | Chlorinating enzyme. | Conserved hypothetical protein. | 0.524 |
Psyr_2610 | Psyr_0931 | Psyr_2610 | Psyr_0931 | Chlorinating enzyme. | Hemolysin-type calcium-binding region. | 0.594 |
Psyr_2610 | Psyr_2040 | Psyr_2610 | Psyr_2040 | Chlorinating enzyme. | YD repeat protein. | 0.409 |
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