STRINGSTRING
Psyr_4995 Psyr_4995 Psyr_4997 Psyr_4997 Psyr_4994 Psyr_4994 Psyr_4969 Psyr_4969 Psyr_2320 Psyr_2320 Psyr_4083 Psyr_4083 Psyr_2321 Psyr_2321 Psyr_2040 Psyr_2040 Psyr_0685 Psyr_0685 Psyr_4870 Psyr_4870 Psyr_4871 Psyr_4871
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_4995RHS protein. (171 aa)    
Predicted Functional Partners:
Psyr_4997
YD repeat protein.
     0.911
Psyr_4994
Rhs-related protein.
   
 0.889
Psyr_4969
PAAR.
  
   
 0.769
Psyr_2320
YD repeat protein; Methyl-accepting chemotaxis protein.
 
     0.715
Psyr_4083
PAAR.
  
   
 0.715
Psyr_2321
YD repeat protein.
 
     0.659
Psyr_2040
YD repeat protein.
  
     0.603
Psyr_0685
PAAR.
      
 0.588
Psyr_4870
Hypothetical protein.
 
     0.586
Psyr_4871
Hypothetical protein.
 
     0.528
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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