STRINGSTRING
Psyr_5008 Psyr_5008 Psyr_2183 Psyr_2183 Psyr_2710 Psyr_2710 Psyr_0495 Psyr_0495 Psyr_1816 Psyr_1816 Psyr_2564 Psyr_2564 Psyr_3118 Psyr_3118 Psyr_3530 Psyr_3530 Psyr_5010 Psyr_5010 Psyr_4228 Psyr_4228 Psyr_1707 Psyr_1707
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_5008Transcriptional regulator, GntR family. (245 aa)    
Predicted Functional Partners:
Psyr_2183
Transcriptional regulator, GntR family.
  
     0.772
Psyr_2710
Transcriptional regulator, GntR family.
  
     0.760
Psyr_0495
Transcriptional regulator, GntR family.
  
     0.751
Psyr_1816
Transcriptional regulator, GntR family.
  
     0.738
Psyr_2564
Transcriptional regulator, GntR family.
  
     0.738
Psyr_3118
Transcriptional regulator, GntR family.
  
  
 0.738
Psyr_3530
Transcriptional regulator, GntR family.
  
     0.695
Psyr_5010
Conserved hypothetical protein.
      
 0.671
Psyr_4228
Transcriptional regulator, GntR family.
  
  
 0.638
Psyr_1707
Transcriptional regulator, GntR family.
  
  
 0.583
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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