STRINGSTRING
Psyr_5046 Psyr_5046 Psyr_5045 Psyr_5045 Psyr_4736 Psyr_4736 purK purK purE purE Psyr_3782 Psyr_3782 KatE KatE Psyr_2445 Psyr_2445
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_5046Transglycosylase-associated protein. (81 aa)    
Predicted Functional Partners:
Psyr_5045
Conserved hypothetical protein.
       0.594
Psyr_4736
Conserved hypothetical protein.
 
     0.467
purK
5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.456
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.456
Psyr_3782
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.445
KatE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.410
Psyr_2445
Multi-sensor hybrid histidine kinase.
  
  
 0.407
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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