STRINGSTRING
Psyr_5056 Psyr_5056 Psyr_2910 Psyr_2910 Psyr_5055 Psyr_5055 Psyr_5059 Psyr_5059 Psyr_5057 Psyr_5057 Psyr_5058 Psyr_5058 Psyr_5054 Psyr_5054
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_5056Transcriptional regulator, GntR family. (520 aa)    
Predicted Functional Partners:
Psyr_2910
Transcriptional regulator, GntR family.
  
     0.762
Psyr_5055
YeeE/YedE.
       0.644
Psyr_5059
GCN5-related N-acetyltransferase.
 
     0.620
Psyr_5057
Negative transcriptional regulator.
       0.592
Psyr_5058
GCN5-related N-acetyltransferase.
       0.592
Psyr_5054
Protein of unknown function UPF0187.
       0.409
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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