STRINGSTRING
Psyr_5062 Psyr_5062 Psyr_3600 Psyr_3600 Psyr_1928 Psyr_1928 Psyr_3624 Psyr_3624 Psyr_4318 Psyr_4318 Psyr_5061 Psyr_5061 Psyr_1366 Psyr_1366 Psyr_5060 Psyr_5060 Psyr_3357 Psyr_3357
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_5062Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (316 aa)    
Predicted Functional Partners:
Psyr_3600
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.760
Psyr_1928
Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
     0.688
Psyr_3624
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.645
Psyr_4318
Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
     0.613
Psyr_5061
acetyl-CoA carboxylase carboxyltransferase subunit alpha / biotin carboxylase.
   
   0.566
Psyr_1366
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.524
Psyr_5060
Oxaloacetate decarboxylase, alpha subunit.
 
     0.503
Psyr_3357
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.423
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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