STRINGSTRING
Psyr_5066 Psyr_5066 Psyr_3587 Psyr_3587 Psyr_4155 Psyr_4155 Psyr_5067 Psyr_5067 UvrD UvrD Psyr_0640 Psyr_0640 Psyr_3621 Psyr_3621 Psyr_0867 Psyr_0867
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_5066Similar to mitochondrial import inner membrane translocase, subunit Tim44. (281 aa)    
Predicted Functional Partners:
Psyr_3587
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.597
Psyr_4155
Protein of unknown function DUF615; Belongs to the UPF0307 family.
  
     0.570
Psyr_5067
Conserved hypothetical protein.
       0.537
UvrD
ATP-dependent DNA helicase UvrD.
       0.493
Psyr_0640
Lipoprotein, putative.
  
     0.473
Psyr_3621
Conserved hypothetical protein.
  
     0.431
Psyr_0867
Conserved hypothetical protein.
  
     0.427
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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